ModFossa: A library for modeling ion channels using Python

نویسندگان

  • Gareth B. Ferneyhough
  • Corey M. Thibeault
  • Sergiu M. Dascalu
  • Frederick C. Harris
چکیده

The creation and simulation of ion channel models using continuous-time Markov processes is a powerful and well-used tool in the field of electrophysiology and ion channel research. While several software packages exist for the purpose of ion channel modeling, most are GUI based, and none are available as a Python library. In an attempt to provide an easy-to-use, yet powerful Markov model-based ion channel simulator, we have developed ModFossa, a Python library supporting easy model creation and stimulus definition, complete with a fast numerical solver, and attractive vector graphics plotting.

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ModFossa: A Python Library for Ion Channel Modeling

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عنوان ژورنال:
  • Journal of bioinformatics and computational biology

دوره 14 3  شماره 

صفحات  -

تاریخ انتشار 2016